• B-Mode Echotexture Analysis and Color Doppler Sonography in Canine Mammary Tumors 

      Mulazimoglu, Serkan Baris; Beceriklisoy, Hakki Bulent; Schafer-Somi, Sabine; Kaya, Mahir; Bumin, Ali; Ozenc, Erhan; Gultiken, Nilgun; Kanca, Halit; Gunen, Munevver Ziynet; Kutsal, Osman; Emre, Birten; Evangelos, Kiossis; Aslan, Selim (Kafkas Univ, Veteriner Fakultesi Dergisi, 2016)
      Forty-one mammary gland tumors from twenty eight bitches were used for the study. Ultrasonographic examinations of tumor masses were performed before surgical excision and a quadratic region-of-interest (ROI) was chosen ...
    • Görüntü Bölütleme ve Görüntü Benzetimi Yöntemleri Yardımı ile Hastalığın Teşhis ve Tedavi Sonrası Süreçlerinin Desteklenmesi: Keratokonus Örneği 

      Kaya, Hilal; Cavusoglu, Abdullah; Cakmak, Hasan Basri; Sen, Baha; Delen, Dursun (Gazi Univ, Fac Engineering Architecture, 2016)
      A supporting application for field experts on diagnosing Keratoconus disease and monitoring the healing stage after treatment by a unified system of image segmentation and image simulation processes of corneal images was ...
    • Sentioscope: A Soccer Player Tracking System Using Model Field Particles 

      Baysal, Sermetcan; Duygulu, Pinar (Ieee-Inst Electrical Electronics Engineers Inc, 2016)
      Tracking multiple players is crucial to analyze soccer videos in real time. Yet, rapid illumination changes and occlusions among players who look similar from a distance make tracking in soccer very difficult. Particle-f ...
    • Cross-Layer Energy Minimization For Underwater Aloha Networks 

      Koseoglu, Mehmet; Karasan, Ezhan; Chen, Lin (Ieee-Inst Electrical Electronics Engineers Inc, 2017)
      Underwater networks suffer from energy efficiency challenges due to difficulties in recharging underwater nodes. In addition, underwater acoustic networks show unique transmission characteristics such as frequency-dependent ...
    • On 3-Uniform Hypergraphs Without A Cycle Of A Given Length 

      Furedi, Zoltan; Ozkahya, Lale (Elsevier Science Bv, 2017)
      We study the maximum number of hyperedges in a 3-uniform hypergraph on n vertices that does not contain a Berge cycle of a given length l. In particular we prove that the upper bound for C2k+1-free hypergraphs is of the ...
    • A Goal-Driven Evaluation Method Based on Process Mining for Healthcare Processes 

      Erdogan, Tugba Gurgen; Tarhan, Ayca (Mdpi, 2018)
      As a business processes management technique, process mining (PM) has been applied in many domains in the last decade. In healthcare, where most processes are complex, variable, dynamic, and multi-disciplinary in nature, ...
    • Volumetric Object Recognition Using 3-D Cnns On Depth Data 

      Caglayan, Ali; Can, Ahmet Burak (Ieee-Inst Electrical Electronics Engineers Inc, 2018)
      Recognizing 3-D objects has a wide range of application areas from autonomous robots to self-driving vehicles. The popularity of low-cost RGB-D sensors has enabled a rapid progress in 3-D object recognition in the recent ...
    • Tree Structured Dirichlet Processes For Hierarchical Morphological Segmentation 

      Can, Burcu; Manandhar, Suresh (Mit Press, 2018)
      This article presents a probabilistic hierarchical clustering model for morphological segmentation. In contrast to existing approaches to morphology learning, our method allows learning hierarchical organization of word ...
    • Consistency-Based Trust Management In P2P Networks 

      Şahíin, Y; Can, A.B. (2018)
    • Testing Embedded Software: A Survey Of The Literature 

      Garousi, Vahid; Felderer, Michael; Karapicak, Cagri Murat; Yilmaz, Ugur (Elsevier Science Bv, 2018)
      Context Embedded systems have overwhelming penetration around the world. Innovations are increasingly triggered by software embedded in automotive, transportation, medical-equipment, communication, energy, and many other ...
    • Systematic Mapping of Process Mining Studies in Healthcare 

      Erdogan, Tugba Gurgen; Tarhan, Ayca (Ieee-Inst Electrical Electronics Engineers Inc, 2018)
      In the last decade, as an emerging technique for business processes management, process mining (PM) has been applied in many domains, including manufacturing, supply-chain, government, healthcare, and software engineering. ...
    • Laboratory Data Quality Control: A New Cost-Effective Approach 

      Aydos, Murat; Nalbant, Ahmet; Vural, Yilmaz (Sage Publications Inc, 2018)
      In industrial and medical laboratories, prior to initiating the daily test procedure, the accuracy of the system is observed by measuring the reference control values. Measurements and test results may be below or above ...
    • Turkish Lexicon Expansion By Using Finite State Automata 

      Ozturk, Burak; Can, Burcu (2019)
      Turkish is an agglutinative language with rich morphology. A Turkish verb can have thousands of different word forms. Therefore, sparsity becomes an issue in many Turkish natural language processing (NLP) applications. ...
    • Identifying Criminal Organizations From Their Social Network Structures 

      Cinar, Muhammet Serkan; Genc, Burkay; Sever, Hayri (2019)
      Identification of criminal structures within very large social networks is an essential security feat. By identifying such structures, it may be possible to track, neutralize, and terminate the corresponding criminal ...
    • The Cafa Challenge Reports Improved Protein Function Prediction And New Functional Annotations For Hundreds Of Genes Through Experimental Screens 

      Zhou, Naihui; Jiang, Yuxiang; Bergquist, Timothy R.; Lee, Alexandra J.; Kacsoh, Balint Z.; Crocker, Alex W.; Lewis, Kimberley A.; Georghiou, George; Nguyen, Huy N.; Hamid, Md Nafiz; Davis, Larry; Dogan, Tunca; Atalay, Volkan; Rifaioglu, Ahmet S.; Dalkıran, Alperen; Cetin Atalay, Rengul; Zhang, Chengxin; Hurto, Rebecca L.; Freddolino, Peter L.; Zhang, Yang; Bhat, Prajwal; Supek, Fran; Fernández, José M.; Gemovic, Branislava; Perovic, Vladimir R.; Davidović, Radoslav S.; Sumonja, Neven; Veljkovic, Nevena; Asgari, Ehsaneddin; Mofrad, Mohammad R.K.; Profiti, Giuseppe; Savojardo, Castrense; Martelli, Pier Luigi; Casadio, Rita; Boecker, Florian; Schoof, Heiko; Kahanda, Indika; Thurlby, Natalie; McHardy, Alice C.; Renaux, Alexandre; Saidi, Rabie; Gough, Julian; Freitas, Alex A.; Antczak, Magdalena; Fabris, Fabio; Wass, Mark N.; Hou, Jie; Cheng, Jianlin; Wang, Zheng; Romero, Alfonso E.; Paccanaro, Alberto; Yang, Haixuan; Goldberg, Tatyana; Zhao, Chenguang; Holm, Liisa; Törönen, Petri; Medlar, Alan J.; Zosa, Elaine; Borukhov, Itamar; Novikov, Ilya; Wilkins, Angela; Lichtarge, Olivier; Chi, Po-Han; Tseng, Wei-Cheng; Linial, Michal; Rose, Peter W.; Dessimoz, Christophe; Vidulin, Vedrana; Dzeroski, Saso; Sillitoe, Ian; Das, Sayoni; Lees, Jonathan Gill; Jones, David T.; Wan, Cen; Cozzetto, Domenico; Fa, Rui; Torres, Mateo; Warwick Vesztrocy, Alex; Rodriguez, Jose Manuel; Tress, Michael L.; Frasca, Marco; Notaro, Marco; Grossi, Giuliano; Petrini, Alessandro; Re, Matteo; Valentini, Giorgio; Mesiti, Marco; Roche, Daniel B.; Reeb, Jonas; Ritchie, David W.; Aridhi, Sabeur; Alborzi, Seyed Ziaeddin; Devignes, Marie-Dominique; Koo, Da Chen Emily; Bonneau, Richard; Gligorijević, Vladimir; Barot, Meet; Fang, Hai; Toppo, Stefano; Lavezzo, Enrico; Falda, Marco; Berselli, Michele; Tosatto, Silvio C.E.; Carraro, Marco; Piovesan, Damiano; Ur Rehman, Hafeez; Mao, Qizhong; Zhang, Shanshan; Vucetic, Slobodan; Black, Gage S.; Jo, Dane; Suh, Erica; Dayton, Jonathan B.; Larsen, Dallas J.; Omdahl, Ashton R.; McGuffin, Liam J.; Brackenridge, Danielle A.; Babbitt, Patricia C.; Yunes, Jeffrey M.; Fontana, Paolo; Zhang, Feng; Zhu, Shanfeng; You, Ronghui; Zhang, Zihan; Dai, Suyang; Yao, Shuwei; Tian, Weidong; Cao, Renzhi; Chandler, Caleb; Amezola, Miguel; Johnson, Devon; Chang, Jia-Ming; Liao, Wen-Hung; Liu, Yi-Wei; Pascarelli, Stefano; Frank, Yotam; Hoehndorf, Robert; Kulmanov, Maxat; Boudellioua, Imane; Politano, Gianfranco; Di Carlo, Stefano; Benso, Alfredo; Hakala, Kai; Ginter, Filip; Mehryary, Farrokh; Kaewphan, Suwisa; Björne, Jari; Moen, Hans; Tolvanen, Martti E.E.; Salakoski, Tapio; Kihara, Daisuke; Jain, Aashish; Šmuc, Tomislav; Altenhoff, Adrian; Ben-Hur, Asa; Rost, Burkhard; Brenner, Steven E.; Orengo, Christine A.; Jeffery, Constance J.; Bosco, Giovanni; Hogan, Deborah A.; Martin, Maria J.; O’Donovan, Claire; Mooney, Sean D.; Greene, Casey S.; Radivojac, Predrag; Friedberg, Iddo (2019)
      Background The Critical Assessment of Functional Annotation (CAFA) is an ongoing, global, community-driven effort to evaluate and improve the computational annotation of protein function. Results Here, we report on the ...
    • Correlation Of Critical Success Factors With Success Of Software Projects: An Empirical Investigation 

      Garousi, Vahid; Tarhan, Ayca; Pfahl, Dietmar; Coskuncay, Ahmet; Demirors, Onur (2019)
      Software engineering researchers have, over the years, proposed different critical success factors (CSFs) which are believed to be critically correlated with the success of software projects. To conduct an empirical ...
    • Complexity, Size And Internal Quality In The Evolution Of Mobile Applications: An Exploratory Study 

      Gezici, Bahar; Tarhan, Ayca; Chouseinoglou, Oumout (2019)
      Mobile applications are becoming complex software systems as they rapidly evolve and grow constantly to meet user requirements. However, satisfying these requirements may lead to poor design choices known as `antipatterns' ...
    • A Two-Dimensional Method For Evaluating Maintainability And Reliability Of Open Source Software 

      Yilmaz, Nebi; Tarhan, Ayca (2019)
      Increased popularity of open source software (OSS) has led to a considerable proliferation of alternative software. However, there is a lack of studies in literature that shed light into the evaluation of OSS by organizations. ...
    • Assessing Risks And Threats With Layered Approach To Internet Of Things Security 

      Aydos, Murat; Vural, Yilmaz; Tekerek, Adem (2019)
      Internet of Things is the next-generation Internet network created by intelligent objects with software and sensors, employed in a wide range of fields such as automotive, construction, health, textile, education and ...
    • Examination Of Various Classification Strategies In Classification Of Lung Nodule Characteristics 

      Kaya, Aydin; Keceli, Ali Seydi; Can, Ahmet Burak (2019)
      Nodule characteristics used in the evaluation of lung nodules are generally subjective assessments of the expert opinions. Among these characteristics, the most known and used one for prediction is the degree of malignancy. ...