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dc.contributor.advisorErtoy Baydar, Dilek
dc.contributor.authorAkman, Orkun
dc.date.accessioned2019-05-10T13:37:03Z
dc.date.issued2019
dc.date.submitted2018-12-07
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Classe M, Gregoire V, Malouf GG, Leroy X. Reply to 'Incidence, clinicopathological features and fusion transcript landscape of translocation renal cell carcinomas'. Histopathology. 2017;71(5):836-7. 50. Lee HJ, Shin DH, Noh GY, Kim YK, Kim A, Shin N, et al. Combination of immunohistochemistry, FISH and RT-PCR shows high incidence of Xp11 translocation RCC: comparison of three different diagnostic methods. Oncotarget. 2017;8(19):30756-65. 51. Inamura K, Fujiwara M, Togashi Y, Nomura K, Mukai H, Fujii Y, et al. Diverse fusion patterns and heterogeneous clinicopathologic features of renal cell carcinoma with t(6;11) translocation. Am J Surg Pathol. 2012;36(1):35-42. 52. Ellis CL, Eble JN, Subhawong AP, Martignoni G, Zhong M, Ladanyi M, et al. Clinical heterogeneity of Xp11 translocation renal cell carcinoma: impact of fusion subtype, age, and stage. Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc. 2014;27(6):875-86. 53. Geller JI, Argani P, Adeniran A, Hampton E, De Marzo A, Hicks J, et al. Translocation renal cell carcinoma: lack of negative impact due to lymph node spread. Cancer. 2008;112(7):1607-16. 54. Meyer PN, Clark JI, Flanigan RC, Picken MM. Xp11.2 translocation renal cell carcinoma with very aggressive course in five adults. Am J Clin Pathol. 2007;128(1):70-9. 55. Rais-Bahrami S, Drabick JJ, De Marzo AM, Hicks J, Ho C, Caroe AE, et al. Xp11 translocation renal cell carcinoma: delayed but massive and lethal metastases of a chemotherapy-associated secondary malignancy. Urology. 2007;70(1):178 e3-6. 56. Dal Cin P, Stas M, Sciot R, De Wever I, Van Damme B, Van den Berghe H. Translocation (X;1) reveals metastasis 31 years after renal cell carcinoma. Cancer Genet Cytogenet. 1998;101(1):58-61. 57. Peckova K, Vanecek T, Martinek P, Spagnolo D, Kuroda N, Brunelli M, et al. Aggressive and nonaggressive translocation t(6;11) renal cell carcinoma: comparative study of 6 cases and review of the literature. Ann Diagn Pathol. 2014;18(6):351-7. 58. Damayanti NP, Budka JA, Khella HWZ, Ferris MW, Ku SY, Kauffman E, et al. Therapeutic Targeting of TFE3/IRS-1/PI3K/mTOR Axis in Translocation Renal Cell Carcinoma. Clin Cancer Res. 2018. 59. Hou MM, Hsieh JJ, Chang NJ, Huang HY, Wang HM, Chuang CK, et al. Response to sorafenib in a patient with metastatic xp11 translocation renal cell carcinoma. Clin Drug Investig. 2010;30(11):799-804. 60. Pwint TP, Macaulay V, Roberts IS, Sullivan M, Protheroe A. An adult Xp11.2 translocation renal carcinoma showing response to treatment with sunitinib. Urol Oncol. 2011;29(6):821-4. 61. Numakura K, Tsuchiya N, Yuasa T, Saito M, Obara T, Tsuruta H, et al. A case study of metastatic Xp11.2 translocation renal cell carcinoma effectively treated with sunitinib. Int J Clin Oncol. 2011;16(5):577-80. 62. Malouf GG, Camparo P, Oudard S, Schleiermacher G, Theodore C, Rustine A, et al. Targeted agents in metastatic Xp11 translocation/TFE3 gene fusion renal cell carcinoma (RCC): a report from the Juvenile RCC Network. Ann Oncol. 2010;21(9):1834-8. 63. Rua Fernandez OR, Escala Cornejo R, Navarro Martin M, Garcia Munoz M, Antunez Plaza P, Garcia Dominguez AR, et al. Renal Cell Carcinoma Associated With Xp11.2 Translocation/TFE3 Gene-fusion: A Long Response to mammalian target of rapamycin (mTOR) Inhibitors. Urology. 2018;117:41-3.tr_TR
dc.identifier.urihttp://hdl.handle.net/11655/7147
dc.description.abstractTranslocation type renal cell carcinomas (t-RCCs) are newly defined renal tubular epithelial tumors. The oncogenic activations of TFE3 and TFEB genes, which are two members of the microphthalmia-associa-transcription factor (MiTF) family, due to translocations and fusions with different partner genes plays a role in their pathogenesis. The clinical and pathological spectrum of these tumors, which are many times misdiagnosed because of the lack of knowledge regarding them, have not yet been fully demonstrated. In this study, 89 cases with the potential for t-RCC were identified among all renal cell carcinomas diagnosed in the Hacettepe University Medical School Department of Pathology between 2000 and 2018. In the fluorescence in-situ hybridization study, 32 were diagnosed as TFE3 and 3 were diagnosed as TFEB t-RCC. These thirty-five cases were analyzed and clinical, histomorphological and immunohistochemical features were determined. The clinical course of these tumors were documented and the relationship between their prognosis and morphological features was attempted to be determined. Thus, some of the histological findings show statistically significant correlation with general and disease-free survival. The different morphological features that are of prognostic significance are likely to be associated with different fusion gene partners. In our study, we aimed to analyze the genetic changes of tumors in a more detailed way and to use advanced molecular methods. However, the RT-PCR method used did not yield a result in formalin-fixed paraffin-embedded tumor samples.tr_TR
dc.description.tableofcontentsTEŞEKKÜR i ÖZET ii ABSTRACT iii İÇİNDEKİLER iv SİMGELER VE KISALTMALAR vi ŞEKİLLER vii RESİMLER viii TABLOLAR ix GRAFİKLER x 1. GİRİŞ 1 2. GENEL BİLGİLER 3 2.1. Tarihçe 3 2.2. Etyoloji 3 2.3. Epidemiyoloji 5 2.4. Histopatolojik Özellikler 5 2.5. İmmünhistokimyasal Profil 6 2.6. Prognoz 7 3. GEREÇ VE YÖNTEM 8 3.1. Olguların seçimi 8 3.2. Doku Mikrodizilerinin Oluşturulması 8 3.3. Floresan In-situ Hibridizasyon (FISH) 8 3.4. Histopatolojik Kriterlerin Tanımlanması 10 3.5. İmmünhistokimyasal Çalışma ve Değerlendirme 14 3.5.1. TFE-3 15 3.5.2. TFE-B 16 3.5.3. Pan-Keratin 16 3.5.4. Keratin 7 16 3.5.5. EMA 17 3.5.6. CD10 17 3.5.7. AMACR 18 3.5.8. PAX8 18 3.5.9. CA9 19 3.5.10. Vimentin 19 3.5.11. Melan-A 20 3.5.12. HMB-45 20 3.6. Moleküler Çalışmalar 21 3.7. Klinik Veriler 21 3.8. İstatistik 21 4. BULGULAR 23 4.1. FISH ile yapılan ön eleme 23 4.2. Genel Bulgular 23 4.3. Histomorfolojik Bulgular 25 4.3.1. TFE3 t-RCC’lerde histomorfoloji 25 4.3.2. TFEB t-RCC’lerde histomorfoloji 26 4.4. İmmünhistokimyasal Bulgular 28 4.4.1. TFE3 t-RCC’lerde immünhistokimyasal profil 28 4.4.2. TFEB t-RCC’lerde immünhistokimyasal profil 28 4.5. İstatistiksel Analiz Sonuçları 29 4.5.1. Yaşam Analizi Sonuçları 30 4.5.2. Tek değişkenli risk analizi 38 4.5.3. Çoklu değişken Cox regresyon analizi 40 5. TARTIŞMA 43 6. SONUÇ VE ÖNERİLER 48 7. KAYNAKLAR 49 8. EKLER 54tr_TR
dc.language.isoturtr_TR
dc.publisherTıp Fakültesitr_TR
dc.rightsinfo:eu-repo/semantics/openAccesstr_TR
dc.subjectBöbrektr_TR
dc.subjectRenal hücreli karsinomtr_TR
dc.subjectRCCtr_TR
dc.subjectTranslokasyontr_TR
dc.subjectTFE3tr_TR
dc.subjectTFEBtr_TR
dc.subjectMiTFtr_TR
dc.titleMiT Ailesi Translokasyon Tipi Renal Hücreli Karsinomların Morfolojik, İmmünhistokimyasal ve Moleküler Özellikler Açısından Değerlendirilmesitr_TR
dc.typeinfo:eu-repo/semantics/doctoralThesistr_TR
dc.description.ozetTranslokasyon tipi renal hücreli karsinomlar (t-RCC'ler) henüz yeni tanımlanan böbrek tübül epitel tümörleridir. Patogenezlerinde, mikroftalmi-assosiye transkripsiyon faktör (MiTF) ailesinin iki üyesi olan TFE3 ve TFEB genlerinin translokasyonları ve farklı partner genlerle füzyonları sonucu onkogenik aktivasyonları rol oynamaktadır. Az bilinmeleri nedeni ile çok kez atlanan bu tümörlerin klinik ve patolojik spektrumları henüz tam anlamı ile ortaya konabilmiş değildir. Bu çalışmada 2000-2018 döneminde HÜTF Tıbbi Patoloji Anabilim Dalı'nda tanı almış tüm renal hücreli karsinomlar arasında t-RCC olabilme potansiyelin sahip 89 vaka tespit edilmiştir. Uygulanan flöresan in-situ hibridizasyon çalışması ile bunların 32'sinin TFE3 ve 3'ünün TFEB t-RCC olduğu tespit edilmiştir. Otuz beş olgu analiz edilmiş, klinik, histomorfolojik ve immünhistokimyasal özellikleri ortaya konmuştur. Tümörlerin klinik seyirleri dökümante edilmiş, prognozları ile morfolojik özellikleri arasındaki ilişki tespit edilmeye çalışılmıştır. Nitekim histolojik bulgulardan bir kaçı genel ve hastalıksız sağ kalım ile istatistiksel olarak anlamlı korrelasyon göstermektedir. Prognostik öneme sahip farklı morfolojik özelliklerin farklı füzyon gen partner'ları ile bağlantılı olması muhtemeldir. Bunu aydınlatmayı hedefleyerek, çalışmamızda tümörlerin genetik değişikliklerinin daha detaylı analizine gidilmiş ve ileri moleküler metodlara başvurulmuştur. Ancak kullanılan RT-PCR yöntemi formalin fikse parafine gömülü tümör örneklerinde sonuç vermemiştir.tr_TR
dc.contributor.departmentTıbbi Patolojitr_TR
dc.embargo.termsAcik erisimtr_TR
dc.embargo.lift2019-05-10T13:37:03Z
dc.subtypemedicineThesis


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